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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853759.1_cds_XP_016512355.1_25007
CDS Infomation

[gene=LOC107829398] [db_xref=GeneID:107829398] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016512355.1] [location=complement(join(72543..73696,74341..74370,74466..74492,76709..77414))] [gbkey=CDS]
Sequence

ATGGTTACTCTCTTGGACTTGGAAATAGGAAAAGAAAAGAAGCACACTAGACAAATGTTT
AATCATCTTTTTGCAATATTATTCATCGTCATCTTTCTGCAAACATGCAATGCTAGGAAG
AGCAAACACTATTGTGTCCCTTCTGCCTGTGGCCACATCCATAACATAAGCTTCCCTTTT
CGCTTAAACACCGATCCACAATATTGCGGTTTTCCACTATATGAATTAGCTTGTGAAAGT
AACCAAACCATTATATCCAAGACCATTATATCCAAGAAGTGGTATGTGCAAGCCATCAAT
TATGGTAACAACACAATTCACCTTGTAGATCCATCTTTACAAACACAAGATATGTGCTCT
CTAATACCTCTTCATCTTACATTCGACCAATACAATACTAATATCTTTCACTCATATTAT
TATCCTGATGGAGTAACAGAGCCTATTTTCATGTTCAACTGTCCATTTGCTATAAACACG
ACCACCTCTACATTTCTGGAAATTACTGGCTGCAAATTAAGCACACACACTTACTTAAAG
ATTGGAGAAATGAATGCATCTCAAGTCAGTGATGGATGCAGAGTGGAACTTGTAGCGCTA
ACCTCTTGGCCTAACATTAAACATAACAACAACATTTCTCTTTCTGATTTTCATCAAGCA
ATCATCTATGGGTTTGAGCTTCAATATTCTCTGGGAGAAAGGCTTGGTGTTACTCAACGG
AAATGGATTCTCTGGGCCGTGATGCTAGCTCAGTTTTTCACAATGTATTTGGGAGCAAGA
TTTGTGATCGGCCTACCCATCATAATTGTATTTCTGATGTTCAAATTCAAAAGGAGGCAT
TTGTCCATGTATGATATGATTGAAGGCTTTCTGCAGACACAAAACAATTTCATGCCAATC
AGATATAATTACTCCCACATAAAGAGAATGACCAGAGGGTTCAAAGAGAAATTAGGTGAG
GGAGGTTTTGGCAAAGTATATAAAGGAAAACTTCGCAGTGGTAGGGATGTAGCAGTGAAA
ATGTTGAGCAAGCCTAAAGCTGGTGGCGGCCAAGATTTCATGAATGAAATAGCTACCATT
GGAAGGATTCATCATGTGAATGTAGTTGGACTCGTGGGGTATTGTGTTGAGACAACAGAG
CGCGCTCTTGTATACGATTTCATGCCCAATGGATCACTTGATAAGTACATCGCCAGTCAA
GAAGGAAGCCCTGTGTTAAGTTGGCAGAGGAAGTATGAAATTGTTGTTGGAGTGGCTCGA
GGAATTGAGTATTTGCATCGAGGCTGTGACATACGAATTTTGCACTTTGACATCAAGCCT
CACAACATTCTTTTGGATGAGAATTTCATCCCAAAGATTTCTGACTTTGGACTTGCTAAA
CAATATCCAACGGATAATAGCATTGTGACTCTTACAGCTGCTCGTGGAACGATTGGATAT
GTAGCTCCAGAGTTGATCAGCAGAAGCATTGGAGCAATATCTTATAAAGCTGATGTTTAC
AGCTTTGGAATGCTGCTAATGGAAATGTTGGACATGAAGAGAAATGTAGTTGCAAATGAA
GAAAACTCTAGCCAATATTTTCCATCTTGGATTTATGATAAGTTCAAAAGGGGGAAGGAA
ATTGTGGTGGATGAAGAAGCAAATGAAGATGAAAAGAAGATAAGTAGAAAGATGACTATA
GTTGCGTTATGGTGCATACAAACAAATCCGGTACAGCGCCCTACAATGAGTGAAGTAATA
GAAATGCTTGAAGGTGAAGTTGAAGTGTTACAACTACCTCCTCAGCCTCTTCAATCTCAA
CCAATTGCTCCATTGTTTCATCAGATGGAAAGTTCCATTACATTTTCGTCTGATTCAATG
GCTTTGTTAGAAAATGCTGCTGATAAACCTGTTGAACTAGACACATATTATGATTGA

Peptide Sequence

PEP ID

XP_016512355.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MVTLLDLEIGKEKKHTRQMFNHLFAILFIVIFLQTCNARKSKHYCVPSACGHIHNISFPF
RLNTDPQYCGFPLYELACESNQTIISKTIISKKWYVQAINYGNNTIHLVDPSLQTQDMCS
LIPLHLTFDQYNTNIFHSYYYPDGVTEPIFMFNCPFAINTTTSTFLEITGCKLSTHTYLK
IGEMNASQVSDGCRVELVALTSWPNIKHNNNISLSDFHQAIIYGFELQYSLGERLGVTQR
KWILWAVMLAQFFTMYLGARFVIGLPIIIVFLMFKFKRRHLSMYDMIEGFLQTQNNFMPI
RYNYSHIKRMTRGFKEKLGEGGFGKVYKGKLRSGRDVAVKMLSKPKAGGGQDFMNEIATI
GRIHHVNVVGLVGYCVETTERALVYDFMPNGSLDKYIASQEGSPVLSWQRKYEIVVGVAR
GIEYLHRGCDIRILHFDIKPHNILLDENFIPKISDFGLAKQYPTDNSIVTLTAARGTIGY
VAPELISRSIGAISYKADVYSFGMLLMEMLDMKRNVVANEENSSQYFPSWIYDKFKRGKE
IVVDEEANEDEKKISRKMTIVALWCIQTNPVQRPTMSEVIEMLEGEVEVLQLPPQPLQSQ
PIAPLFHQMESSITFSSDSMALLENAADKPVELDTYYD

Transcript Sequence

Gene sequence data has not been registered.